▼1%
¥4,843,716
Avg. Base Salary (JPY)
/ year
Avg. Base Salary (JPY)
10%
¥60k
MEDIAN
¥5m
90%
¥8m
The average salary for a Data Scientist is ¥4,843,716 in 2025
Base Salary
¥60k - ¥8m
Bonus
¥123k - ¥2m
Total Pay
¥60k - ¥9m
Is Average Data Scientist Salary in Japan your job title? Find out what you should be paid
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What is the Pay by Experience Level for Data Scientists?
Find your market worth – how it works:
Common Health Benefits for a Data Scientist
Medical
73%
Dental
9%
None
27%
Gender Breakdown for Data Scientists
Male
85.7%
Female
14.3%
This data is based on 7 survey responses. Learn more about the gender pay gap.
FAQs About Data Scientists
What is the highest pay for Data Scientists?
Our data indicates that the highest pay for a Data Scientist is ¥8m / year
What is the lowest pay for Data Scientists?
Our data indicates that the lowest pay for a Data Scientist is ¥60k / year
How can Data Scientists increase their salary?
Increasing your pay as a Data Scientist is possible in different ways. Change of employer: Consider a career move to a new employer that is willing to pay higher for your skills. Level of Education: Gaining advanced degrees may allow this role to increase their income potential and qualify for promotions. Managing Experience: If you are a Data Scientist that oversees more junior Data Scientists, this experience can increase the likelihood to earn more.